MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
6_8CXCR23O2_S6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 497
bases: 2,471,173 bps
CDS: 2,088
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 48
misc RNA:
Total features: 2,141
Total number of protein coding genes annotated/found:
2,088
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5051|JADGLR010000029.1
SEQF5051_00143
Genome Viewer
NA
AA
2265/755
10313-8049
Glycogen phosphorylase
SEQF5051|JADGLR010000029.1
SEQF5051_00144
Genome Viewer
NA
AA
1509/503
11814-10306
4-alpha-glucanotransferase
SEQF5051|JADGLR010000029.1
SEQF5051_00145
Genome Viewer
NA
AA
708/236
11991-12698
HTH-type transcriptional regulator TreR
SEQF5051|JADGLR010000029.1
SEQF5051_00146
Genome Viewer
NA
AA
267/89
13294-13028
hypothetical protein
SEQF5051|JADGLR010000029.1
SEQF5051_00147
Genome Viewer
NA
AA
228/76
13511-13284
hypothetical protein
SEQF5051|JADGLR010000029.1
SEQF5051_00148
Genome Viewer
NA
AA
2115/705
15916-13802
putative ATP-dependent Clp protease ATP-binding subunit
SEQF5051|JADGLR010000029.1
SEQF5051_00149
Genome Viewer
NA
AA
123/41
16548-16670
hypothetical protein
SEQF5051|JADGLR010000029.1
SEQF5051_00150
Genome Viewer
NA
AA
1095/365
18072-16978
tRNA(Met) cytidine acetate ligase
SEQF5051|JADGLR010000029.1
SEQF5051_00151
Genome Viewer
NA
AA
735/245
18803-18069
Glycine/sarcosine N-methyltransferase
SEQF5051|JADGLR010000029.1
SEQF5051_00152
Genome Viewer
NA
AA
351/117
19364-19014
Ribosomal silencing factor RsfS
SEQF5051|JADGLR010000029.1
SEQF5051_00153
Genome Viewer
NA
AA
603/201
20252-19650
hypothetical protein
SEQF5051|JADGLR010000029.1
SEQF5051_00154
Genome Viewer
NA
AA
633/211
20881-20249
Nicotinate-nucleotide adenylyltransferase
SEQF5051|JADGLR010000029.1
SEQF5051_00155
Genome Viewer
NA
AA
312/104
21234-20923
RNA-binding protein YhbY
SEQF5051|JADGLR010000029.1
SEQF5051_00156
Genome Viewer
NA
AA
1107/369
22355-21249
putative protein YqeH
SEQF5051|JADGLR010000029.1
SEQF5051_00157
Genome Viewer
NA
AA
528/176
22883-22356
Pyrophosphatase PpaX
SEQF5051|JADGLR010000029.1
SEQF5051_00158
Genome Viewer
NA
AA
627/209
24179-23553
Copper homeostasis protein CutC
SEQF5051|JADGLR010000029.1
SEQF5051_00159
Genome Viewer
NA
AA
927/309
25169-24243
putative inner membrane transporter YicL
SEQF5051|JADGLR010000029.1
SEQF5051_00160
Genome Viewer
NA
AA
1491/497
27161-25671
Galactose-1-phosphate uridylyltransferase
SEQF5051|JADGLR010000029.1
SEQF5051_00161
Genome Viewer
NA
AA
1173/391
28347-27175
Galactokinase
SEQF5051|JADGLR010000029.1
SEQF5051_00162
Genome Viewer
NA
AA
1002/334
28500-29501
HTH-type transcriptional repressor MelR
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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